9 December 2019

esetVis R package

esetVis

esetVis is an R package to explore and visualize gene expression data provided in ExpressionSet format.

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Advantage: Visualizations for any transcriptomics (e.g. microarray or RNAseq) or proteomics data

esetVis

  • visual exploratory data analysis
  • create plots for specific features
  • identify clusters of biological samples and genes

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esetVis

  • investigate expression profile for a set of genes
  • represent the correlation between genes

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daVis R package

daVis

daVis is an R package to explore and visualize the output from differential expression analysis provided as a list of top tables.

daVis

  • visualize relation between logFC of multiple comparisons
  • investigate overlap of significantly affected genes