Bioconductor

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- Key dates
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- Previous EuroBioc meetings
- Organizing committee


Bioconductor: https://bioconductor.org
Hosted on GitHub Pages
Theme by orderedlist

Conference programme

Monday 9 December

9:00 - 9:15 Registration
9:15 - 9:30 Welcome and introductions
9:30 - 10:00 Invited talk 1: Martin Morgan - The Bioconductor Project: Updates and Directions
10:00 - 10:30 Invited talk 2: Andrea Rau - Individualized multi-omic pathway deviation scores using multiple factor analysis
10:30 - 11:00 Break + poster session
11:00 - 12:00 Flashlight session 1 (7 x 8 minutes)
12:00 - 12:30 Invited talk 3: Vince Carey - Software ecosystem concepts for federated genomic analysis
12:30 - 13:30 Lunch + poster session
13:30 - 14:30 Flashlight session 2 (7 x 8 minutes)
14:30 - 15:00 Invited talk 4: Levi Waldron - Multi’omic analysis of subtype evolution and heterogeneity in high-grade serous ovarian carcinoma
15:00 - 15:30 Invited talk 5: Lieven Clement - The pitfalls of summarisation and imputation on label free mass spectrometry based proteomics
15:30 - 16:00 Coffee break + poster session
16:00 - 16:30 Invited talk 6: Christine Choirat - Enabling Practical Reproducibility With the RENKU Platform
16:30 - 17:02 Flashlight session 3 (4 x 8 minutes)
17:02 - 17:15 Presentation of group activities and wrap-up.

Evening:

18:30 - 21:30 Dinner at the Hof ter Musschen (located at walking distance from the conference venue)

The conference dinner is sponsored by GSK.

Tuesday 10 December

9:00 - 10:00 Flashlight session 4 (7 x 8 minutes)
10:00 - 10:30 Invited talk 7: Davide Risso - Efficient and scalable clustering of single-cell RNA-seq data using Bioconductor
10:30 - 11:00 Break + poster session
11:00 - 12:30 Group activities
12:30 - 13:30 Lunch + poster session
13:30 - 14:00 Group activities presentations
14:00 - 14:30 Invited talk 8: Ewa Szczurek - Linear effects models of signaling pathways from combinatorial perturbation data
14:30 - 15:00 Invited talk 9: Elisabetta Mereu - Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects
15:00 - 15:30 Invited talk 10: Andreas Moor - Spatially resolved transcriptomics in mammalian tissues
15:30 - 16:00 Wrap-up and closing of conference
16:00 - 17:00 Preparation of user/developer sessions

Wednesday 11 December (optional)

9:00 - 10:30 User/developer sessions
10:30 - 11:00 Break
11:00 - 12:30 User/developer sessions (cont.)
12:30 - 13:30 Lunch
13:30 - 15:00 User/developer sessions (cont.)
15:00 - 16:00 Sessions feedback and wrap-up

Flashlight talks

Session 1

Chair: Charlotte Soneson

Session 2

Chair: Laurent Gatto

Session 3

Chair: Elisabetta Mereu

Session 4

Chair: Andrea Rau

Posters